PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G175200.1.p
Common NamePRUPE_ppa020940mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 187aa    MW: 21097.4 Da    PI: 10.2138
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G175200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.81.1e-091567655
                        HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-..STCHHHHHHHHHHHHHHH CS
                 HLH  6 nerErrRRdriNsafeeLrellPk.askapskK..lsKaeiLekAveYIksLq 55
                        + +Er+RR +++   ++L +l+P+  ska++ K  ls    L +A  YIk+L+
  Prupe.5G175200.1.p 15 KTVERNRRIHMKGLCFKLASLVPPqHSKASNSKdtLSQQKQLDLASSYIKQLR 67
                        679*********************88877777768****************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.28E-4771No hitNo description
PROSITE profilePS5088810.15966IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.32E-101383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-101384IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.6E-71566IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MKKCRGESSS KLDRKTVERN RRIHMKGLCF KLASLVPPQH SKASNSKDTL SQQKQLDLAS  60
SYIKQLRERI ENLKERKEKA MRSQLGIDAN STIDADNAMM VRSRLPVLEL RDSGSIIEVM  120
LISGLNKNFM LFEVISVLEE EGAEVVSASF STVGDKIFHS LHAQVKISRV GVETSTVWQR  180
LQYLIY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007211000.11e-135hypothetical protein PRUPE_ppa020940mg
TrEMBLM5WEP81e-135M5WEP8_PRUPE; Uncharacterized protein
STRINGVIT_17s0000g08150.t012e-80(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68492141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.18e-31bHLH family protein